Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Gm7774-201ENSMUST00000200064 533 ntBASIC13.13□□□□□ -0.31
Nkx2-2P42586 Gm44608-201ENSMUST00000206827 855 ntBASIC13.13□□□□□ -0.31
Nkx2-2P42586 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.12□□□□□ -0.31
Nkx2-2P42586 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.12□□□□□ -0.31
Nkx2-2P42586 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.12□□□□□ -0.31
Nkx2-2P42586 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Gm8584-201ENSMUST00000171982 758 ntBASIC13.12□□□□□ -0.31
Nkx2-2P42586 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Gm5779-201ENSMUST00000218467 910 ntBASIC13.12□□□□□ -0.31
Nkx2-2P42586 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Nkx2-2P42586 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.11□□□□□ -0.31
Nkx2-2P42586 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-2P42586 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-2P42586 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms