Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.76□□□□□ -0.53
Timp3P39876 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.76□□□□□ -0.53
Timp3P39876 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.75□□□□□ -0.53
Timp3P39876 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.75□□□□□ -0.53
Timp3P39876 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.75□□□□□ -0.53
Timp3P39876 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.75□□□□□ -0.53
Timp3P39876 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Timp3P39876 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Timp3P39876 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.75□□□□□ -0.53
Timp3P39876 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Timp3P39876 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.75□□□□□ -0.53
Timp3P39876 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Timp3P39876 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Timp3P39876 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.75□□□□□ -0.53
Timp3P39876 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Timp3P39876 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Timp3P39876 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.74□□□□□ -0.53
Timp3P39876 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.74□□□□□ -0.53
Timp3P39876 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Timp3P39876 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.74□□□□□ -0.53
Timp3P39876 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.74□□□□□ -0.53
Timp3P39876 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Timp3P39876 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.74□□□□□ -0.53
Timp3P39876 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.74□□□□□ -0.53
Timp3P39876 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timp3P39876 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Timp3P39876 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Timp3P39876 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.73□□□□□ -0.53
Timp3P39876 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Timp3P39876 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Gm8410-201ENSMUST00000117225 605 ntBASIC11.73□□□□□ -0.53
Timp3P39876 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.73□□□□□ -0.53
Timp3P39876 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Timp3P39876 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms