Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Clk1P22518 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.37□□□□□ -0.27
Clk1P22518 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.37□□□□□ -0.27
Clk1P22518 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.37□□□□□ -0.27
Clk1P22518 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.37□□□□□ -0.27
Clk1P22518 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clk1P22518 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Clk1P22518 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Clk1P22518 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Clk1P22518 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.36□□□□□ -0.27
Clk1P22518 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.36□□□□□ -0.27
Clk1P22518 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Clk1P22518 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.36□□□□□ -0.27
Clk1P22518 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Rpph1-201ENSMUST00000175096 319 ntBASIC13.36□□□□□ -0.27
Clk1P22518 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.36□□□□□ -0.27
Clk1P22518 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Gm10175-201ENSMUST00000086013 645 ntBASIC13.36□□□□□ -0.27
Clk1P22518 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.36□□□□□ -0.27
Clk1P22518 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.36□□□□□ -0.27
Clk1P22518 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Clk1P22518 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Clk1P22518 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clk1P22518 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Clk1P22518 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clk1P22518 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clk1P22518 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.35□□□□□ -0.27
Clk1P22518 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Clk1P22518 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Clk1P22518 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Clk1P22518 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.35□□□□□ -0.27
Clk1P22518 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clk1P22518 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clk1P22518 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.35□□□□□ -0.27
Clk1P22518 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.35□□□□□ -0.27
Clk1P22518 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clk1P22518 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms