Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PdgfaP20033 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PdgfaP20033 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PdgfaP20033 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PdgfaP20033 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PdgfaP20033 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.27□□□□□ -0.13
PdgfaP20033 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.27□□□□□ -0.13
PdgfaP20033 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.27□□□□□ -0.13
PdgfaP20033 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PdgfaP20033 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PdgfaP20033 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.27□□□□□ -0.13
PdgfaP20033 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.27□□□□□ -0.13
PdgfaP20033 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PdgfaP20033 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfaP20033 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
PdgfaP20033 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
PdgfaP20033 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.26□□□□□ -0.13
PdgfaP20033 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.26□□□□□ -0.13
PdgfaP20033 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PdgfaP20033 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.26□□□□□ -0.13
PdgfaP20033 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.26□□□□□ -0.13
PdgfaP20033 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.26□□□□□ -0.13
PdgfaP20033 Gm13597-201ENSMUST00000121239 375 ntBASIC14.26□□□□□ -0.13
PdgfaP20033 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PdgfaP20033 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.26□□□□□ -0.13
PdgfaP20033 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.26□□□□□ -0.13
PdgfaP20033 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Gm8396-201ENSMUST00000057361 823 ntBASIC14.26□□□□□ -0.13
PdgfaP20033 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.26□□□□□ -0.13
PdgfaP20033 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PdgfaP20033 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfaP20033 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.25□□□□□ -0.13
PdgfaP20033 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PdgfaP20033 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.25□□□□□ -0.13
PdgfaP20033 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.25□□□□□ -0.13
PdgfaP20033 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.25□□□□□ -0.13
PdgfaP20033 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PdgfaP20033 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms