Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl1P12850 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.85□□□□□ -0.51
Cxcl1P12850 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Gm27300-201ENSMUST00000184085 97 ntBASIC11.85□□□□□ -0.51
Cxcl1P12850 Gm27335-201ENSMUST00000184758 97 ntBASIC11.85□□□□□ -0.51
Cxcl1P12850 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Gm45747-201ENSMUST00000212203 999 ntBASIC11.85□□□□□ -0.51
Cxcl1P12850 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.85□□□□□ -0.51
Cxcl1P12850 Gm10154-201ENSMUST00000084445 354 ntBASIC11.85□□□□□ -0.51
Cxcl1P12850 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cxcl1P12850 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl1P12850 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.84□□□□□ -0.51
Cxcl1P12850 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.84□□□□□ -0.51
Cxcl1P12850 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Gm13036-201ENSMUST00000117799 748 ntBASIC11.84□□□□□ -0.51
Cxcl1P12850 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.84□□□□□ -0.51
Cxcl1P12850 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.84□□□□□ -0.51
Cxcl1P12850 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl1P12850 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl1P12850 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcl1P12850 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Cxcl1P12850 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcl1P12850 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcl1P12850 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl1P12850 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl1P12850 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl1P12850 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl1P12850 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.83□□□□□ -0.52
Cxcl1P12850 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl1P12850 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl1P12850 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms