Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl3P10855 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl3P10855 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl3P10855 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl3P10855 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl3P10855 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccl3P10855 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccl3P10855 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ccl3P10855 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccl3P10855 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.58□□□□□ -0.4
Ccl3P10855 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccl3P10855 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccl3P10855 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccl3P10855 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ccl3P10855 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.58□□□□□ -0.4
Ccl3P10855 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccl3P10855 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Ccl3P10855 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccl3P10855 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl3P10855 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccl3P10855 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccl3P10855 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccl3P10855 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccl3P10855 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccl3P10855 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Gm12742-201ENSMUST00000117326 410 ntBASIC12.57□□□□□ -0.4
Ccl3P10855 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccl3P10855 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccl3P10855 Gm2495-201ENSMUST00000191160 466 ntBASIC12.57□□□□□ -0.4
Ccl3P10855 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccl3P10855 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccl3P10855 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccl3P10855 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.57□□□□□ -0.4
Ccl3P10855 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.57□□□□□ -0.4
Ccl3P10855 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.57□□□□□ -0.4
Ccl3P10855 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ccl3P10855 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccl3P10855 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl3P10855 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccl3P10855 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccl3P10855 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.56□□□□□ -0.4
Ccl3P10855 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccl3P10855 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.56□□□□□ -0.4
Ccl3P10855 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms