Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Polr2aP08775 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Polr2aP08775 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Polr2aP08775 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Polr2aP08775 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Polr2aP08775 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Polr2aP08775 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Polr2aP08775 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Mir877-201ENSMUST00000104738 85 ntBASIC16.02■□□□□ 0.16
Polr2aP08775 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Gm6621-201ENSMUST00000193251 772 ntBASIC16.02■□□□□ 0.16
Polr2aP08775 Gm42550-201ENSMUST00000201553 960 ntBASIC16.02■□□□□ 0.16
Polr2aP08775 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.02■□□□□ 0.16
Polr2aP08775 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.02■□□□□ 0.16
Polr2aP08775 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.02■□□□□ 0.16
Polr2aP08775 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Polr2aP08775 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Polr2aP08775 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Polr2aP08775 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.02■□□□□ 0.15
Polr2aP08775 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.02■□□□□ 0.15
Polr2aP08775 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.02■□□□□ 0.15
Polr2aP08775 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Polr2aP08775 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Polr2aP08775 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Polr2aP08775 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Polr2aP08775 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.01■□□□□ 0.15
Polr2aP08775 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Polr2aP08775 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.01■□□□□ 0.15
Polr2aP08775 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.01■□□□□ 0.15
Polr2aP08775 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.01■□□□□ 0.15
Polr2aP08775 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.01■□□□□ 0.15
Polr2aP08775 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.01■□□□□ 0.15
Polr2aP08775 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.01■□□□□ 0.15
Polr2aP08775 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Polr2aP08775 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Polr2aP08775 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Polr2aP08775 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16■□□□□ 0.15
Polr2aP08775 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Gm13369-201ENSMUST00000119442 987 ntBASIC16■□□□□ 0.15
Polr2aP08775 Gm43068-201ENSMUST00000201095 1273 ntBASIC16■□□□□ 0.15
Polr2aP08775 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16■□□□□ 0.15
Polr2aP08775 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16■□□□□ 0.15
Polr2aP08775 Gm10146-201ENSMUST00000072739 309 ntBASIC16■□□□□ 0.15
Polr2aP08775 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Polr2aP08775 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16■□□□□ 0.15
Polr2aP08775 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Polr2aP08775 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Polr2aP08775 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms