Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.55□□□□□ -0.24
ApoeP08226 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.55□□□□□ -0.24
ApoeP08226 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.55□□□□□ -0.24
ApoeP08226 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.55□□□□□ -0.24
ApoeP08226 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.55□□□□□ -0.24
ApoeP08226 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
ApoeP08226 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
ApoeP08226 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ApoeP08226 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.54□□□□□ -0.24
ApoeP08226 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.54□□□□□ -0.24
ApoeP08226 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ApoeP08226 Gm45167-201ENSMUST00000208007 322 ntBASIC13.54□□□□□ -0.24
ApoeP08226 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.54□□□□□ -0.24
ApoeP08226 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.54□□□□□ -0.24
ApoeP08226 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ApoeP08226 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.54□□□□□ -0.24
ApoeP08226 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ApoeP08226 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.54□□□□□ -0.24
ApoeP08226 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.54□□□□□ -0.24
ApoeP08226 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.54□□□□□ -0.24
ApoeP08226 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ApoeP08226 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ApoeP08226 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ApoeP08226 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.53□□□□□ -0.24
ApoeP08226 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ApoeP08226 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
ApoeP08226 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ApoeP08226 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.52□□□□□ -0.24
ApoeP08226 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ApoeP08226 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ApoeP08226 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ApoeP08226 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.52□□□□□ -0.24
ApoeP08226 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ApoeP08226 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ApoeP08226 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
ApoeP08226 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ApoeP08226 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
ApoeP08226 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ApoeP08226 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ApoeP08226 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Gm17807-201ENSMUST00000186869 298 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms