Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.16■□□□□ 0.02
TnfP06804 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.16■□□□□ 0.02
TnfP06804 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.16■□□□□ 0.02
TnfP06804 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.16■□□□□ 0.02
TnfP06804 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
TnfP06804 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.16■□□□□ 0.02
TnfP06804 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TnfP06804 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
TnfP06804 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TnfP06804 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TnfP06804 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TnfP06804 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TnfP06804 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TnfP06804 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.15■□□□□ 0.02
TnfP06804 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TnfP06804 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.15■□□□□ 0.02
TnfP06804 Gm21854-201ENSMUST00000179901 471 ntBASIC15.15■□□□□ 0.02
TnfP06804 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.15■□□□□ 0.02
TnfP06804 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.15■□□□□ 0.02
TnfP06804 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TnfP06804 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.15■□□□□ 0.02
TnfP06804 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TnfP06804 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Gm22189-201ENSMUST00000103822 86 ntBASIC15.14■□□□□ 0.01
TnfP06804 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TnfP06804 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.14■□□□□ 0.01
TnfP06804 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.14■□□□□ 0.01
TnfP06804 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.14■□□□□ 0.01
TnfP06804 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.14■□□□□ 0.01
TnfP06804 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.14■□□□□ 0.01
TnfP06804 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.14■□□□□ 0.01
TnfP06804 Gm44608-201ENSMUST00000206827 855 ntBASIC15.14■□□□□ 0.01
TnfP06804 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.14■□□□□ 0.01
TnfP06804 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.14■□□□□ 0.01
TnfP06804 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.14■□□□□ 0.01
TnfP06804 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.14■□□□□ 0.01
TnfP06804 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TnfP06804 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TnfP06804 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TnfP06804 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TnfP06804 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TnfP06804 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TnfP06804 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.13■□□□□ 0.01
TnfP06804 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms