Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hcn1O88704 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn1O88704 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.73□□□□□ -0.21
Hcn1O88704 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Hcn1O88704 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Hcn1O88704 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.73□□□□□ -0.21
Hcn1O88704 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hcn1O88704 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.73□□□□□ -0.21
Hcn1O88704 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.73□□□□□ -0.21
Hcn1O88704 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.73□□□□□ -0.21
Hcn1O88704 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.73□□□□□ -0.21
Hcn1O88704 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn1O88704 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hcn1O88704 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Hcn1O88704 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hcn1O88704 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hcn1O88704 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Gm11745-201ENSMUST00000121669 448 ntBASIC13.72□□□□□ -0.21
Hcn1O88704 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.72□□□□□ -0.21
Hcn1O88704 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hcn1O88704 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hcn1O88704 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hcn1O88704 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.72□□□□□ -0.21
Hcn1O88704 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Hcn1O88704 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn1O88704 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hcn1O88704 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.71□□□□□ -0.21
Hcn1O88704 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.71□□□□□ -0.21
Hcn1O88704 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Gm26308-201ENSMUST00000157768 69 ntBASIC13.71□□□□□ -0.21
Hcn1O88704 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hcn1O88704 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hcn1O88704 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.71□□□□□ -0.21
Hcn1O88704 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.71□□□□□ -0.21
Hcn1O88704 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hcn1O88704 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn1O88704 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hcn1O88704 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hcn1O88704 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Hcn1O88704 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.71□□□□□ -0.22
Hcn1O88704 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Hcn1O88704 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.71□□□□□ -0.22
Hcn1O88704 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hcn1O88704 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms