Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.98□□□□□ -0.33
Lmx1bO88609 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.98□□□□□ -0.33
Lmx1bO88609 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.98□□□□□ -0.33
Lmx1bO88609 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.98□□□□□ -0.33
Lmx1bO88609 Gm5566-201ENSMUST00000116118 459 ntBASIC12.98□□□□□ -0.33
Lmx1bO88609 Gm14767-201ENSMUST00000121559 586 ntBASIC12.98□□□□□ -0.33
Lmx1bO88609 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.98□□□□□ -0.33
Lmx1bO88609 Gm44344-201ENSMUST00000200287 129 ntBASIC12.98□□□□□ -0.33
Lmx1bO88609 Shd-206ENSMUST00000225145 998 ntBASIC12.98□□□□□ -0.33
Lmx1bO88609 Gm2423-201ENSMUST00000074863 733 ntBASIC12.98□□□□□ -0.33
Lmx1bO88609 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.98□□□□□ -0.33
Lmx1bO88609 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.98□□□□□ -0.33
Lmx1bO88609 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lmx1bO88609 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.97□□□□□ -0.33
Lmx1bO88609 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lmx1bO88609 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Mir1897-201ENSMUST00000122581 272 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm27437-201ENSMUST00000183429 107 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm29310-201ENSMUST00000185468 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21825-201ENSMUST00000185728 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm29109-201ENSMUST00000185895 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21896-201ENSMUST00000186520 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21873-201ENSMUST00000186728 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21794-201ENSMUST00000187056 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21880-201ENSMUST00000187275 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21826-201ENSMUST00000187451 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21198-201ENSMUST00000188393 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21749-201ENSMUST00000189343 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21901-201ENSMUST00000189568 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm29424-201ENSMUST00000189716 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm28599-201ENSMUST00000189838 694 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21867-201ENSMUST00000189917 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm29269-201ENSMUST00000190087 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21722-201ENSMUST00000190153 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm28423-201ENSMUST00000190701 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21899-201ENSMUST00000190745 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21910-201ENSMUST00000191163 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21849-201ENSMUST00000191571 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm28678-201ENSMUST00000191593 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm20910-201ENSMUST00000193268 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lmx1bO88609 Gm21871-201ENSMUST00000194621 696 ntBASIC12.97□□□□□ -0.33
Lmx1bO88609 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.97□□□□□ -0.33
Lmx1bO88609 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.97□□□□□ -0.33
Lmx1bO88609 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lmx1bO88609 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmx1bO88609 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lmx1bO88609 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.96□□□□□ -0.33
Lmx1bO88609 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms