Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vti1bO88384 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.66□□□□□ -0.22
Vti1bO88384 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vti1bO88384 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.66□□□□□ -0.22
Vti1bO88384 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Gm15467-201ENSMUST00000120582 445 ntBASIC13.66□□□□□ -0.22
Vti1bO88384 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Gm5177-201ENSMUST00000183092 997 ntBASIC13.66□□□□□ -0.22
Vti1bO88384 Mir8117-201ENSMUST00000184773 107 ntBASIC13.66□□□□□ -0.22
Vti1bO88384 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.66□□□□□ -0.22
Vti1bO88384 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.66□□□□□ -0.22
Vti1bO88384 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vti1bO88384 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.66□□□□□ -0.22
Vti1bO88384 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1bO88384 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.65□□□□□ -0.22
Vti1bO88384 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.65□□□□□ -0.22
Vti1bO88384 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Vti1bO88384 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vti1bO88384 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vti1bO88384 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.65□□□□□ -0.22
Vti1bO88384 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.65□□□□□ -0.22
Vti1bO88384 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Vti1bO88384 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.65□□□□□ -0.22
Vti1bO88384 Gm17968-201ENSMUST00000194902 784 ntBASIC13.65□□□□□ -0.22
Vti1bO88384 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.65□□□□□ -0.22
Vti1bO88384 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.65□□□□□ -0.22
Vti1bO88384 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.65□□□□□ -0.22
Vti1bO88384 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Vti1bO88384 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.65□□□□□ -0.22
Vti1bO88384 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vti1bO88384 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1bO88384 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Vti1bO88384 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.64□□□□□ -0.23
Vti1bO88384 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Vti1bO88384 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.64□□□□□ -0.23
Vti1bO88384 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.64□□□□□ -0.23
Vti1bO88384 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.64□□□□□ -0.23
Vti1bO88384 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Thap2-203ENSMUST00000218989 527 ntBASIC13.64□□□□□ -0.23
Vti1bO88384 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vti1bO88384 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms