Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cfdp1O88271 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cfdp1O88271 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cfdp1O88271 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cfdp1O88271 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cfdp1O88271 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cfdp1O88271 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.83■□□□□ 0.44
Cfdp1O88271 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfdp1O88271 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.82■□□□□ 0.44
Cfdp1O88271 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Cfdp1O88271 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Gm4875-201ENSMUST00000118257 786 ntBASIC17.81■□□□□ 0.44
Cfdp1O88271 Gm14719-201ENSMUST00000121891 340 ntBASIC17.81■□□□□ 0.44
Cfdp1O88271 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Gm27838-201ENSMUST00000184829 128 ntBASIC17.81■□□□□ 0.44
Cfdp1O88271 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.81■□□□□ 0.44
Cfdp1O88271 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cfdp1O88271 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cfdp1O88271 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cfdp1O88271 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.81■□□□□ 0.44
Cfdp1O88271 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cfdp1O88271 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Cfdp1O88271 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.81■□□□□ 0.44
Cfdp1O88271 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.81■□□□□ 0.44
Cfdp1O88271 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfdp1O88271 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.8■□□□□ 0.44
Cfdp1O88271 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Gm3436-201ENSMUST00000179930 840 ntBASIC17.8■□□□□ 0.44
Cfdp1O88271 Gm27437-201ENSMUST00000183429 107 ntBASIC17.8■□□□□ 0.44
Cfdp1O88271 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfdp1O88271 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.8■□□□□ 0.44
Cfdp1O88271 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfdp1O88271 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.8■□□□□ 0.44
Cfdp1O88271 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.8■□□□□ 0.44
Cfdp1O88271 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.8■□□□□ 0.44
Cfdp1O88271 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.8■□□□□ 0.44
Cfdp1O88271 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfdp1O88271 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfdp1O88271 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Cfdp1O88271 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cfdp1O88271 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfdp1O88271 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfdp1O88271 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfdp1O88271 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.8■□□□□ 0.44
Cfdp1O88271 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfdp1O88271 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfdp1O88271 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.79■□□□□ 0.44
Cfdp1O88271 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cfdp1O88271 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfdp1O88271 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms