Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Pknox1O70477 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pknox1O70477 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.23□□□□□ -0.13
Pknox1O70477 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.23□□□□□ -0.13
Pknox1O70477 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pknox1O70477 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.22□□□□□ -0.13
Pknox1O70477 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.22□□□□□ -0.13
Pknox1O70477 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.22□□□□□ -0.13
Pknox1O70477 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.22□□□□□ -0.13
Pknox1O70477 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pknox1O70477 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pknox1O70477 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pknox1O70477 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pknox1O70477 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pknox1O70477 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pknox1O70477 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pknox1O70477 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.21□□□□□ -0.13
Pknox1O70477 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.21□□□□□ -0.13
Pknox1O70477 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pknox1O70477 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pknox1O70477 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.21□□□□□ -0.13
Pknox1O70477 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.21□□□□□ -0.13
Pknox1O70477 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.21□□□□□ -0.13
Pknox1O70477 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.21□□□□□ -0.13
Pknox1O70477 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pknox1O70477 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pknox1O70477 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Pknox1O70477 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pknox1O70477 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pknox1O70477 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.21□□□□□ -0.14
Pknox1O70477 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pknox1O70477 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.2□□□□□ -0.14
Pknox1O70477 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.2□□□□□ -0.14
Pknox1O70477 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Gm9727-201ENSMUST00000161387 555 ntBASIC14.2□□□□□ -0.14
Pknox1O70477 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.2□□□□□ -0.14
Pknox1O70477 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.2□□□□□ -0.14
Pknox1O70477 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Gm7461-201ENSMUST00000058918 827 ntBASIC14.2□□□□□ -0.14
Pknox1O70477 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pknox1O70477 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pknox1O70477 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.2□□□□□ -0.14
Pknox1O70477 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pknox1O70477 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pknox1O70477 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms