Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm5745-201ENSMUST00000183748 313 ntBASIC12.09□□□□□ -0.47
Cxcl13O55038 Gm42612-201ENSMUST00000197986 623 ntBASIC12.09□□□□□ -0.47
Cxcl13O55038 Gm43170-201ENSMUST00000199827 612 ntBASIC12.09□□□□□ -0.47
Cxcl13O55038 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.09□□□□□ -0.47
Cxcl13O55038 Gm9797-201ENSMUST00000052902 613 ntBASIC12.09□□□□□ -0.47
Cxcl13O55038 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.09□□□□□ -0.47
Cxcl13O55038 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.08□□□□□ -0.47
Cxcl13O55038 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cxcl13O55038 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cxcl13O55038 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cxcl13O55038 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cxcl13O55038 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Gm28760-201ENSMUST00000185995 736 ntBASIC12.08□□□□□ -0.48
Cxcl13O55038 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.08□□□□□ -0.48
Cxcl13O55038 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.08□□□□□ -0.48
Cxcl13O55038 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.08□□□□□ -0.48
Cxcl13O55038 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cxcl13O55038 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl13O55038 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cxcl13O55038 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.07□□□□□ -0.48
Cxcl13O55038 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cxcl13O55038 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Gm21470-201ENSMUST00000187680 696 ntBASIC12.07□□□□□ -0.48
Cxcl13O55038 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.07□□□□□ -0.48
Cxcl13O55038 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms