Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.82□□□□□ -0.36
NlkO54949 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
NlkO54949 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.82□□□□□ -0.36
NlkO54949 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.82□□□□□ -0.36
NlkO54949 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Grk6-205ENSMUST00000224653 2976 ntBASIC12.82□□□□□ -0.36
NlkO54949 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.81□□□□□ -0.36
NlkO54949 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
NlkO54949 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
NlkO54949 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NlkO54949 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NlkO54949 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.81□□□□□ -0.36
NlkO54949 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.81□□□□□ -0.36
NlkO54949 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.81□□□□□ -0.36
NlkO54949 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NlkO54949 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
NlkO54949 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
NlkO54949 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
NlkO54949 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
NlkO54949 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
NlkO54949 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NlkO54949 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NlkO54949 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
NlkO54949 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NlkO54949 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Gm11764-201ENSMUST00000120221 623 ntBASIC12.8□□□□□ -0.36
NlkO54949 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Gm5682-201ENSMUST00000173402 505 ntBASIC12.8□□□□□ -0.36
NlkO54949 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.8□□□□□ -0.36
NlkO54949 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.8□□□□□ -0.36
NlkO54949 Gm7787-201ENSMUST00000216858 688 ntBASIC12.8□□□□□ -0.36
NlkO54949 AV026068-213ENSMUST00000223675 1171 ntBASIC12.8□□□□□ -0.36
NlkO54949 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NlkO54949 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
NlkO54949 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NlkO54949 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms