Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cl1O35188 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Gm13616-201ENSMUST00000120600 222 ntBASIC13.46□□□□□ -0.25
Cx3cl1O35188 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.46□□□□□ -0.25
Cx3cl1O35188 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.46□□□□□ -0.25
Cx3cl1O35188 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.46□□□□□ -0.25
Cx3cl1O35188 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cl1O35188 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.46□□□□□ -0.26
Cx3cl1O35188 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cl1O35188 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.45□□□□□ -0.26
Cx3cl1O35188 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Gm15693-201ENSMUST00000120470 637 ntBASIC13.45□□□□□ -0.26
Cx3cl1O35188 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Gm27430-201ENSMUST00000184585 107 ntBASIC13.45□□□□□ -0.26
Cx3cl1O35188 Gm29541-201ENSMUST00000191351 678 ntBASIC13.45□□□□□ -0.26
Cx3cl1O35188 Gm44333-201ENSMUST00000197168 107 ntBASIC13.45□□□□□ -0.26
Cx3cl1O35188 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.45□□□□□ -0.26
Cx3cl1O35188 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.45□□□□□ -0.26
Cx3cl1O35188 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cx3cl1O35188 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms