Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Gm6222-201ENSMUST00000120787 396 ntBASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Gm17837-201ENSMUST00000186435 985 ntBASIC10.94□□□□□ -0.66
Gm10553J3QPF1 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10553J3QPF1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Gm25925-201ENSMUST00000158314 306 ntBASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Gm9719-201ENSMUST00000162765 543 ntBASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Gm27622-201ENSMUST00000183779 60 ntBASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Gm28630-201ENSMUST00000187806 498 ntBASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10553J3QPF1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Gm10553J3QPF1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms