Protein–RNA interactions for Protein: J3QP38

Gm21900, Predicted gene, 21900, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21900J3QP38 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.07□□□□□ -0.64
Gm21900J3QP38 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm21900J3QP38 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Gm13836-201ENSMUST00000121159 501 ntBASIC11.06□□□□□ -0.64
Gm21900J3QP38 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.06□□□□□ -0.64
Gm21900J3QP38 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.06□□□□□ -0.64
Gm21900J3QP38 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gm21900J3QP38 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Gm21900J3QP38 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.05□□□□□ -0.64
Gm21900J3QP38 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Gm9682-201ENSMUST00000197505 556 ntBASIC11.05□□□□□ -0.64
Gm21900J3QP38 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.05□□□□□ -0.64
Gm21900J3QP38 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Gm21900J3QP38 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms