Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Rubie-203ENSMUST00000227803 2430 ntBASIC12.15□□□□□ -0.46
Gm3727J3QM54 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Gm10013-201ENSMUST00000106074 672 ntBASIC12.15□□□□□ -0.46
Gm3727J3QM54 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.15□□□□□ -0.46
Gm3727J3QM54 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3727J3QM54 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3727J3QM54 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Gm15165-201ENSMUST00000118140 502 ntBASIC12.14□□□□□ -0.47
Gm3727J3QM54 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.14□□□□□ -0.47
Gm3727J3QM54 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3727J3QM54 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm3727J3QM54 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.13□□□□□ -0.47
Gm3727J3QM54 Gm7506-201ENSMUST00000207758 815 ntBASIC12.13□□□□□ -0.47
Gm3727J3QM54 Gm18032-201ENSMUST00000222541 538 ntBASIC12.13□□□□□ -0.47
Gm3727J3QM54 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.13□□□□□ -0.47
Gm3727J3QM54 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3727J3QM54 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms