Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Gm29649-201ENSMUST00000185649 419 ntBASIC17.16■□□□□ 0.34
NpcdF8VQB8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.16■□□□□ 0.34
NpcdF8VQB8 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.16■□□□□ 0.34
NpcdF8VQB8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.16■□□□□ 0.34
NpcdF8VQB8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Gm6091-201ENSMUST00000098307 165 ntBASIC17.16■□□□□ 0.34
NpcdF8VQB8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NpcdF8VQB8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gm8749-201ENSMUST00000117737 331 ntBASIC17.15■□□□□ 0.34
NpcdF8VQB8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gm16570-201ENSMUST00000161951 436 ntBASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gm8652-201ENSMUST00000181363 964 ntBASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gm27572-201ENSMUST00000183702 255 ntBASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.15■□□□□ 0.34
NpcdF8VQB8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gm5425-201ENSMUST00000214125 459 ntBASIC17.15■□□□□ 0.34
NpcdF8VQB8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NpcdF8VQB8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Gm5187-201ENSMUST00000117317 991 ntBASIC17.14■□□□□ 0.33
NpcdF8VQB8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.14■□□□□ 0.33
NpcdF8VQB8 Gm6013-201ENSMUST00000212264 699 ntBASIC17.14■□□□□ 0.33
NpcdF8VQB8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NpcdF8VQB8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Gm12384-201ENSMUST00000119228 919 ntBASIC17.13■□□□□ 0.33
NpcdF8VQB8 Gm4804-201ENSMUST00000182234 999 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms