Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Rpph1-201ENSMUST00000175096 319 ntBASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Mir3113-201ENSMUST00000175478 76 ntBASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh9F8VPK8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Gm14494-201ENSMUST00000118786 435 ntBASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Gm8000-201ENSMUST00000188378 592 ntBASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Gm44492-201ENSMUST00000197012 141 ntBASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh9F8VPK8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh9F8VPK8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms