Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.1■□□□□ 0.33
Ube4aE9Q735 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.1■□□□□ 0.33
Ube4aE9Q735 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Gm17150-201ENSMUST00000165577 381 ntBASIC17.1■□□□□ 0.33
Ube4aE9Q735 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.1■□□□□ 0.33
Ube4aE9Q735 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.1■□□□□ 0.33
Ube4aE9Q735 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.1■□□□□ 0.33
Ube4aE9Q735 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4aE9Q735 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Gm13829-201ENSMUST00000119600 138 ntBASIC17.09■□□□□ 0.33
Ube4aE9Q735 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.09■□□□□ 0.33
Ube4aE9Q735 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.09■□□□□ 0.33
Ube4aE9Q735 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Gm8927-201ENSMUST00000181978 981 ntBASIC17.09■□□□□ 0.33
Ube4aE9Q735 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.09■□□□□ 0.33
Ube4aE9Q735 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.09■□□□□ 0.33
Ube4aE9Q735 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Gm3222-201ENSMUST00000071282 990 ntBASIC17.09■□□□□ 0.33
Ube4aE9Q735 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.09■□□□□ 0.33
Ube4aE9Q735 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.09■□□□□ 0.33
Ube4aE9Q735 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ube4aE9Q735 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4aE9Q735 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube4aE9Q735 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.08■□□□□ 0.33
Ube4aE9Q735 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.08■□□□□ 0.33
Ube4aE9Q735 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube4aE9Q735 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube4aE9Q735 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.08■□□□□ 0.32
Ube4aE9Q735 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Gm43094-201ENSMUST00000196549 921 ntBASIC17.08■□□□□ 0.32
Ube4aE9Q735 Gm19078-201ENSMUST00000206311 727 ntBASIC17.08■□□□□ 0.32
Ube4aE9Q735 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ube4aE9Q735 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms