Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdr1E9Q0B4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdr1E9Q0B4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdr1E9Q0B4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdr1E9Q0B4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdr1E9Q0B4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdr1E9Q0B4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdr1E9Q0B4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdr1E9Q0B4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Cdr1E9Q0B4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdr1E9Q0B4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Cdr1E9Q0B4 Grk6-205ENSMUST00000224653 2976 ntBASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdr1E9Q0B4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Gm22240-201ENSMUST00000175225 82 ntBASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Gm5587-201ENSMUST00000206270 674 ntBASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdr1E9Q0B4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Gm15165-201ENSMUST00000118140 502 ntBASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Gm14042-201ENSMUST00000120139 833 ntBASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Gm18032-201ENSMUST00000222541 538 ntBASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdr1E9Q0B4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms