Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shank1D3YZU1 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.81□□□□□ -0.36
Shank1D3YZU1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Gm23931-201ENSMUST00000103842 109 ntBASIC12.8□□□□□ -0.36
Shank1D3YZU1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.8□□□□□ -0.36
Shank1D3YZU1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.8□□□□□ -0.36
Shank1D3YZU1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.8□□□□□ -0.36
Shank1D3YZU1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shank1D3YZU1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gm45784-201ENSMUST00000188360 142 ntBASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.79□□□□□ -0.36
Shank1D3YZU1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Shank1D3YZU1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms