Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.72■□□□□ 0.27
Usp42B2RQC2 Mir6956-201ENSMUST00000183598 62 ntBASIC16.72■□□□□ 0.27
Usp42B2RQC2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Gm8584-201ENSMUST00000171982 758 ntBASIC16.71■□□□□ 0.27
Usp42B2RQC2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Gm27680-201ENSMUST00000184192 160 ntBASIC16.71■□□□□ 0.27
Usp42B2RQC2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp42B2RQC2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.71■□□□□ 0.27
Usp42B2RQC2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.71■□□□□ 0.26
Usp42B2RQC2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp42B2RQC2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Usp42B2RQC2 Gm15653-201ENSMUST00000119247 907 ntBASIC16.7■□□□□ 0.26
Usp42B2RQC2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 AA543401-201ENSMUST00000164248 1269 ntBASIC16.7■□□□□ 0.26
Usp42B2RQC2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Gm6888-201ENSMUST00000221983 706 ntBASIC16.7■□□□□ 0.26
Usp42B2RQC2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.7■□□□□ 0.26
Usp42B2RQC2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Usp42B2RQC2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.7■□□□□ 0.26
Usp42B2RQC2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.7■□□□□ 0.26
Usp42B2RQC2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Gm6916-202ENSMUST00000205523 195 ntBASIC16.7■□□□□ 0.26
Usp42B2RQC2 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.7■□□□□ 0.26
Usp42B2RQC2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.7■□□□□ 0.26
Usp42B2RQC2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp42B2RQC2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms