Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gm4271-201ENSMUST00000174444 973 ntBASIC11.47□□□□□ -0.57
Chd6A3KFM7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.47□□□□□ -0.57
Chd6A3KFM7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gm25517-201ENSMUST00000083865 134 ntBASIC11.47□□□□□ -0.57
Chd6A3KFM7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.47□□□□□ -0.57
Chd6A3KFM7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd6A3KFM7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm24830-201ENSMUST00000102024 166 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm25890-201ENSMUST00000177643 165 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm22614-201ENSMUST00000178300 165 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm37230-201ENSMUST00000194491 818 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm22042-201ENSMUST00000082989 165 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm26232-201ENSMUST00000083360 166 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm24136-201ENSMUST00000083374 165 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Gm26110-201ENSMUST00000083971 165 ntBASIC11.46□□□□□ -0.57
Chd6A3KFM7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.46□□□□□ -0.57
Chd6A3KFM7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Gm28450-201ENSMUST00000187349 638 ntBASIC11.46□□□□□ -0.58
Chd6A3KFM7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd6A3KFM7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Gm25880-201ENSMUST00000104331 132 ntBASIC11.45□□□□□ -0.58
Chd6A3KFM7 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Chd6A3KFM7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.45□□□□□ -0.58
Chd6A3KFM7 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.45□□□□□ -0.58
Chd6A3KFM7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Chd6A3KFM7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Gm42779-201ENSMUST00000198807 406 ntBASIC11.45□□□□□ -0.58
Chd6A3KFM7 Gm8894-201ENSMUST00000074642 666 ntBASIC11.45□□□□□ -0.58
Chd6A3KFM7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd6A3KFM7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms