Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.05□□□□□ -0.48
Col6a4A2AX52 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.05□□□□□ -0.48
Col6a4A2AX52 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.05□□□□□ -0.48
Col6a4A2AX52 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.05□□□□□ -0.48
Col6a4A2AX52 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a4A2AX52 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.04□□□□□ -0.48
Col6a4A2AX52 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm18307-201ENSMUST00000206864 949 ntBASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm8463-201ENSMUST00000208573 613 ntBASIC12.04□□□□□ -0.48
Col6a4A2AX52 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm23931-201ENSMUST00000103842 109 ntBASIC12.04□□□□□ -0.48
Col6a4A2AX52 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a4A2AX52 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.03□□□□□ -0.48
Col6a4A2AX52 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.03□□□□□ -0.48
Col6a4A2AX52 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms