Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc194A0A140LIT1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Gm5479-201ENSMUST00000160578 435 ntBASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Gm37230-201ENSMUST00000194491 818 ntBASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc194A0A140LIT1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Gm9385-201ENSMUST00000117563 472 ntBASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Gm45747-201ENSMUST00000212203 999 ntBASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Gm7461-201ENSMUST00000058918 827 ntBASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms