Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm6550-201ENSMUST00000187574 993 ntBASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm45546-201ENSMUST00000211053 2394 ntBASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm4899-201ENSMUST00000178708 719 ntBASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm34391-201ENSMUST00000203706 907 ntBASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Birc2-201ENSMUST00000054878 378 ntBASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm11452-201ENSMUST00000122376 690 ntBASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm7230-201ENSMUST00000173026 815 ntBASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms