Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm27618-201ENSMUST00000183671 60 ntBASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm27622-201ENSMUST00000183779 60 ntBASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm27533-201ENSMUST00000183800 152 ntBASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Shd-206ENSMUST00000225145 998 ntBASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm24543-201ENSMUST00000103867 82 ntBASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm44608-201ENSMUST00000206827 855 ntBASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm13616-201ENSMUST00000120600 222 ntBASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Gm5867-201ENSMUST00000063197 592 ntBASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4a-psA0A0G2JFS9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms