Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.18□□□□□ -0.46
Gm3550W4VSN7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gm17968-201ENSMUST00000194902 784 ntBASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gm2451-201ENSMUST00000199447 999 ntBASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gm10290-201ENSMUST00000200451 999 ntBASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3550W4VSN7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3550W4VSN7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Gm9385-201ENSMUST00000117563 472 ntBASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm3550W4VSN7 Mir8117-201ENSMUST00000184773 107 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms