Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Gm15198-201ENSMUST00000117283 177 ntBASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Gm24196-201ENSMUST00000179161 110 ntBASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac6Q9Z2V5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hdac6Q9Z2V5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Gm13612-201ENSMUST00000119276 390 ntBASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Gm27772-201ENSMUST00000184900 187 ntBASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac6Q9Z2V5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac6Q9Z2V5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms