Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Gm6244-201ENSMUST00000178732 841 ntBASIC16.72■□□□□ 0.27
Scn11aQ9R053 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.72■□□□□ 0.27
Scn11aQ9R053 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.72■□□□□ 0.27
Scn11aQ9R053 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.72■□□□□ 0.27
Scn11aQ9R053 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.72■□□□□ 0.27
Scn11aQ9R053 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Scn11aQ9R053 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
Scn11aQ9R053 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn11aQ9R053 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn11aQ9R053 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.7■□□□□ 0.26
Scn11aQ9R053 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Gm15236-201ENSMUST00000117309 379 ntBASIC16.7■□□□□ 0.26
Scn11aQ9R053 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.7■□□□□ 0.26
Scn11aQ9R053 Gm45784-201ENSMUST00000188360 142 ntBASIC16.7■□□□□ 0.26
Scn11aQ9R053 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.7■□□□□ 0.26
Scn11aQ9R053 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.7■□□□□ 0.26
Scn11aQ9R053 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Scn11aQ9R053 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.7■□□□□ 0.26
Scn11aQ9R053 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn11aQ9R053 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn11aQ9R053 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.69■□□□□ 0.26
Scn11aQ9R053 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn11aQ9R053 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms