Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Gm16198-201ENSMUST00000118766 670 ntBASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chaf1aQ9QWF0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Acot6-202ENSMUST00000222921 3622 ntBASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Gm2451-201ENSMUST00000199447 999 ntBASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Gm10290-201ENSMUST00000200451 999 ntBASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1aQ9QWF0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Gm8749-201ENSMUST00000117737 331 ntBASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1aQ9QWF0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms