Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Gm15427-201ENSMUST00000117288 531 ntBASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Gm13464-201ENSMUST00000119418 935 ntBASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Gm23935-201ENSMUST00000102303 57 ntBASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Gm24270-201ENSMUST00000102326 57 ntBASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Gm24245-201ENSMUST00000157318 57 ntBASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a2Q9JLR1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Gm20553-201ENSMUST00000204205 844 ntBASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms