Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Gm16198-201ENSMUST00000118766 670 ntBASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Gm16026-204ENSMUST00000162652 683 ntBASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Olfr286-202ENSMUST00000205305 969 ntBASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl28Q9JIL2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl28Q9JIL2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.58□□□□□ -0.55
Ccl28Q9JIL2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.55
Ccl28Q9JIL2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Ccl28Q9JIL2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Thap2-203ENSMUST00000218989 527 ntBASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl28Q9JIL2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms