Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Tubb3Q9ERD7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Gm8749-201ENSMUST00000117737 331 ntBASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb3Q9ERD7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm13616-201ENSMUST00000120600 222 ntBASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm43474-201ENSMUST00000196415 774 ntBASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm43125-201ENSMUST00000201724 730 ntBASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms