Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Gm26464-201ENSMUST00000157094 305 ntBASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Gm15376-201ENSMUST00000122258 783 ntBASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Gm19078-201ENSMUST00000206311 727 ntBASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 AC155286.1-201ENSMUST00000218632 448 ntBASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf1Q9EPU4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Gm27701-201ENSMUST00000184498 110 ntBASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Gm18187-201ENSMUST00000196476 984 ntBASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf1Q9EPU4 Gm37736-201ENSMUST00000193564 2802 ntBASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC19.54■□□□□ 0.72
Cpsf1Q9EPU4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms