Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Gm9182-201ENSMUST00000217829 639 ntBASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp5Q9D7S9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Gm13597-201ENSMUST00000121239 375 ntBASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Gm11452-201ENSMUST00000122376 690 ntBASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chmp5Q9D7S9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Gm21362-201ENSMUST00000194272 928 ntBASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Gm37230-201ENSMUST00000194491 818 ntBASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp5Q9D7S9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms