Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Gm9013-201ENSMUST00000132939 882 ntBASIC14.54□□□□□ -0.08
Sf3a3Q9D554 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Mir3081-201ENSMUST00000175305 84 ntBASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Gm17808-201ENSMUST00000200859 894 ntBASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3a3Q9D554 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Sf3a3Q9D554 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Gm5587-201ENSMUST00000206270 674 ntBASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Gm45328-201ENSMUST00000210942 917 ntBASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sf3a3Q9D554 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms