Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim42Q9D2H5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Gm9726-201ENSMUST00000180321 678 ntBASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim42Q9D2H5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim42Q9D2H5 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.33□□□□□ -0.11
Trim42Q9D2H5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim42Q9D2H5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms