Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Gm12008-201ENSMUST00000117791 755 ntBASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Gm10175-201ENSMUST00000086013 645 ntBASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpusd4Q9CWX4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Matn2-206ENSMUST00000228570 2798 ntBASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpusd4Q9CWX4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms