Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pfdn1Q9CWM4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pfdn1Q9CWM4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pfdn1Q9CWM4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Gm15039-201ENSMUST00000118914 875 ntBASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Gm44430-201ENSMUST00000203376 995 ntBASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn1Q9CWM4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn1Q9CWM4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Gm12933-201ENSMUST00000120203 872 ntBASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Gm27463-201ENSMUST00000183569 57 ntBASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms