Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.87■□□□□ 0.29
Smc3Q9CW03 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Gm45747-201ENSMUST00000212203 999 ntBASIC16.86■□□□□ 0.29
Smc3Q9CW03 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc3Q9CW03 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Gm14140-201ENSMUST00000119999 995 ntBASIC16.85■□□□□ 0.29
Smc3Q9CW03 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc3Q9CW03 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.84■□□□□ 0.29
Smc3Q9CW03 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.84■□□□□ 0.29
Smc3Q9CW03 Gm15483-201ENSMUST00000120338 456 ntBASIC16.84■□□□□ 0.29
Smc3Q9CW03 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Gm17968-201ENSMUST00000194902 784 ntBASIC16.84■□□□□ 0.29
Smc3Q9CW03 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc3Q9CW03 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.84■□□□□ 0.29
Smc3Q9CW03 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Smc3Q9CW03 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms