Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm15427-201ENSMUST00000117288 531 ntBASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm44492-201ENSMUST00000197012 141 ntBASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm5364-201ENSMUST00000216789 889 ntBASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb1Q9CQ70 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Gm18737-201ENSMUST00000173594 937 ntBASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Gm27741-201ENSMUST00000185060 237 ntBASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
H2afb1Q9CQ70 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb1Q9CQ70 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms