Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.31□□□□□ -0.12
Cdh23Q99PF4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Gm20482-202ENSMUST00000174729 825 ntBASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gm45186-201ENSMUST00000206874 478 ntBASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdh23Q99PF4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Mir686-201ENSMUST00000102174 109 ntBASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Gm2991-201ENSMUST00000173338 480 ntBASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Gm25927-201ENSMUST00000175058 117 ntBASIC14.29□□□□□ -0.12
Cdh23Q99PF4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cdh23Q99PF4 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Gm26927-201ENSMUST00000182385 965 ntBASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms