Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Gm16505-201ENSMUST00000179981 232 ntBASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Gm42997-202ENSMUST00000200321 985 ntBASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.8□□□□□ -0.04
Col25a1Q99MQ5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col25a1Q99MQ5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Gm12134-201ENSMUST00000122109 520 ntBASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col25a1Q99MQ5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col25a1Q99MQ5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms