Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Gm24513-201ENSMUST00000174964 138 ntBASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Gm27397-201ENSMUST00000184997 107 ntBASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Gm45747-201ENSMUST00000212203 999 ntBASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Gm16026-204ENSMUST00000162652 683 ntBASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Gm17968-201ENSMUST00000194902 784 ntBASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1b1Q99LU0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Carlr-201ENSMUST00000181515 2574 ntBASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1b1Q99LU0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms