Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Gm15427-201ENSMUST00000117288 531 ntBASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Rpph1-201ENSMUST00000175096 319 ntBASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Gm15483-201ENSMUST00000120338 456 ntBASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.86□□□□□ -0.19
Cstf3Q99LI7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf3Q99LI7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Mir3113-201ENSMUST00000175478 76 ntBASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms